hisat2

Graph based aligner

Name

hisat2

Programs

• extract_exons.py
• extract_splice_sites.py
• hisat2
• hisat2-align-l
• hisat2-align-s
• hisat2-build
• hisat2-build-l
• hisat2-build-s
• hisat2-inspect
• hisat2-inspect-l
• hisat2-inspect-s
• hisat2_extract_exons.py
• hisat2_extract_snps_haplotypes_UCSC.py
• hisat2_extract_snps_haplotypes_VCF.py
• hisat2_extract_splice_sites.py
• hisat2_simulate_reads.py

Homepage

• https://daehwankimlab.github.io/hisat2/

Version

2.2.2

License

• GNU General Public License v3.0 or later

Maintainers

• Justin Bedő

Platforms

• x86_64-linux
• i686-linux

Defined

Source